Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917081.1_cds_XP_016466719.1_59545
CDS Infomation

[gene=LOC107789426] [db_xref=GeneID:107789426] [protein=shikimate O-hydroxycinnamoyltransferase-like] [protein_id=XP_016466719.1] [location=join(4196..4603,7418..8317)] [gbkey=CDS]
Sequence

ATGAAGATCGAGGTGAAAGAATCGACGATGGTGAAGCCGGCGACGGAGACGCCGCAACAG
AGGCTGTGGAACTCAAATGTGGATTTAGTGGTGCCGAATTTCCACACGCCGAGTGTTTAC
TTCTACAGGCCAACGGGATCCCCAAATTTCTTCGACGGAAAAGTGCTAAAGGAGGCACTT
AGCAAAGCGCTTGTGCCGTTTTATCCTATGGCTGGGAGACTGTGTAGGGACGAAGACGGT
CGTATTGAGATTGACTGTAAAGGTCAGGGAGTGCTTTTTGTGGAAGCTGAGTCGGATGGA
GTGGTGGATGATTTTGGTGATTTTGCGCCGACGTTGGAACTCCGTCAACTCATCCCCGCC
GTTGATTACTCACAAGGAATTCAATCGTATGCTCTCCTGGTTTTGCAGATAACACATTTC
AAATGTGGGGGAGTTTCCCTTGGTGTGGGCATGCAACATCACGCAGCAGATGGAGCTTCT
GGTCTTCACTTCATCAACACATGGTCCGATATGGCTCGTGGTCTGGACCTCACCATCCCA
CCTTTCATAGACCGGACCCTCCTCCGTGCTCGTGATCCACCTCAGCCTCAGTTTCCCCAC
GTCGAGTACCAGCCACCTCCCACTCTCAAAGTAACTCCAGAAAACACCACCAACCCTGAA
GTTGTTCCTGAAACCAGTGTGTCCATCTTCAAACTAACCCGTGATCAAATCAATACCCTC
AAAGCCAAGTCCAAGGAAGATGGAAATACCGTTAACTACAGCTCCTACGAGATGTTGGCA
GGACATGTGTGGCGCTCCACGTGCATGGCACGAGGACTTGCTCATGATCAAGAAACCAAA
TTGTACATAGCAACTGATGGACGTTCCAGGCTTCGGCCCTCTCTCCCACCAGGCTATTTC
GGTAATGTGATATTTACTACTACTCCTATTGCAGTGGCTGGTGATATCCAATCAAAACCT
ATTTGGTATGCTGCCAGTAAATTACATGATGCACTGGCTAGAATGGACAATGACTATTTA
AGATCAGCTCTTGATTATTTGGAGTTGCAGCCTGACTTAAAGGCTCTTGTTCGTGGTGCA
CATACATTTAAGTGCCCGAATTTAGGAATAACTAGTTGGTCTAGGCTGCCAATCCATGAT
GCTGATTTTGGCTGGGGTAGGCCTATATTTATGGGACCTGGTGGTATTGCTTATGAAGGT
TTAAGCTTTATATTGCCAAGTCCTACAAATGATGGCAGTCAATCAGTTGCCATCTCGCTG
CAAGCAGAACACATGAAACTTTTCGAGAAGTTCTTGTATGACTTTTGA

Peptide Sequence

PEP ID

XP_016466719.1
PEP Infomation

PREDICTED: shikimate O-hydroxycinnamoyltransferase-like [Nicotiana tabacum]
Sequence

MKIEVKESTMVKPATETPQQRLWNSNVDLVVPNFHTPSVYFYRPTGSPNFFDGKVLKEAL
SKALVPFYPMAGRLCRDEDGRIEIDCKGQGVLFVEAESDGVVDDFGDFAPTLELRQLIPA
VDYSQGIQSYALLVLQITHFKCGGVSLGVGMQHHAADGASGLHFINTWSDMARGLDLTIP
PFIDRTLLRARDPPQPQFPHVEYQPPPTLKVTPENTTNPEVVPETSVSIFKLTRDQINTL
KAKSKEDGNTVNYSSYEMLAGHVWRSTCMARGLAHDQETKLYIATDGRSRLRPSLPPGYF
GNVIFTTTPIAVAGDIQSKPIWYAASKLHDALARMDNDYLRSALDYLELQPDLKALVRGA
HTFKCPNLGITSWSRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSQSVAISL
QAEHMKLFEKFLYDF

Transcript Sequence

Gene sequence data has not been registered.